Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa transferase | FAP39_15740 | Not Available | - | 3239065 - 3239484 | 14711.5 |
| hypothetical protein | FAP39_15745 | Not Available | - | 3239522 - 3240592 | 40008.9 |
| rida family protein | FAP39_15845 | Not Available | - | 3255904 - 3256248 | 12270.7 |
| abc transporter permease | FAP39_15850 | Not Available | - | 3256251 - 3256997 | 28085.4 |
| abc transporter permease | FAP39_15855 | Not Available | - | 3257021 - 3257710 | 24893.1 |
| abc transporter substrate-binding protein | FAP39_15860 | Not Available | - | 3257778 - 3258569 | 28630.6 |
| atp-binding cassette domain-containing protein | FAP39_15865 | Not Available | - | 3258596 - 3259366 | 28099.9 |
| fad-dependent oxidoreductase | FAP39_15870 | Not Available | - | 3259363 - 3260748 | 48191.1 |
| (2fe-2s)-binding protein | FAP39_15875 | Not Available | - | 3260741 - 3261058 | 11086.4 |
| fad-binding oxidoreductase | FAP39_15880 | Not Available | - | 3261024 - 3262148 | 39909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.