Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| [protein-pii] uridylyltransferase | FAP39_00955 | Not Available | - | 205141 - 207951 | 105943.0 |
| penicillin-binding protein activator | FAP39_00960 | Not Available | - | 207911 - 209080 | 39546.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | FAP39_00965 | Not Available | + | 209178 - 210035 | 30171.2 |
| hypothetical protein | FAP39_00970 | Not Available | + | 210109 - 210465 | 13110.6 |
| glutathione synthase | FAP39_00975 | Not Available | + | 210529 - 211467 | 34921.8 |
| atp-binding protein | FAP39_00980 | Not Available | - | 211468 - 212985 | 53635.6 |
| glutathione s-transferase | FAP39_00985 | Not Available | - | 213057 - 213929 | 31656.5 |
| histidine phosphatase family protein | FAP39_00990 | Not Available | - | 213988 - 214563 | 21015.7 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | FAP39_00995 | Not Available | - | 214560 - 215081 | 18180.9 |
| hypothetical protein | FAP39_01000 | Not Available | + | 215285 - 216058 | 28178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.