Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer synthase | FAP39_00855 | Not Available | + | 185734 - 186375 | 24074.8 |
| atpase | FAP39_00860 | Not Available | + | 186429 - 187949 | 55961.3 |
| sdr family oxidoreductase | FAP39_00865 | Not Available | + | 187946 - 188680 | 26389.7 |
| hypothetical protein | FAP39_00870 | Not Available | - | 188689 - 189450 | 27720.6 |
| sulfite exporter taue/safe family protein | FAP39_00875 | Not Available | - | 189453 - 190370 | 32123.2 |
| abc transporter permease | FAP39_00880 | Not Available | - | 190463 - 191428 | 34140.3 |
| abc transporter permease | FAP39_00885 | Not Available | - | 191428 - 192522 | 38952.8 |
| abc transporter atp-binding protein | FAP39_00890 | Not Available | - | 192622 - 194151 | 55247.7 |
| hypothetical protein | FAP39_00895 | Not Available | - | 194148 - 194504 | 12715.0 |
| bmp family abc transporter substrate-binding protein | FAP39_00900 | Not Available | - | 194602 - 195603 | 34855.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.