Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | FAP39_00805 | Not Available | + | 173803 - 174690 | 32843.6 |
| taxi family trap transporter solute-binding subunit | FAP39_00810 | Not Available | + | 174776 - 175747 | 34147.4 |
| trap transporter fused permease subunit | FAP39_00815 | Not Available | + | 175839 - 178463 | 93505.4 |
| universal stress protein | FAP39_00820 | Not Available | + | 178475 - 178894 | 15260.5 |
| protein meaa | FAP39_00825 | Not Available | - | 179000 - 180967 | 71873.8 |
| gnat family n-acetyltransferase | FAP39_00830 | Not Available | - | 181067 - 181657 | 21201.7 |
| glycerol-3-phosphate acyltransferase | FAP39_00835 | Not Available | + | 181730 - 183088 | 50970.3 |
| crotonyl-coa carboxylase/reductase | FAP39_00840 | Not Available | + | 183242 - 184528 | 47340.5 |
| hypothetical protein | FAP39_00845 | Not Available | + | 184769 - 184984 | 7483.64 |
| luxr family transcriptional regulator | FAP39_00850 | Not Available | + | 184929 - 185642 | 26940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.