Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia litoralis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia litoralis strain CL-ES2
Accession NumberSULI00000000.1
Gene Summary
Adenine Count
808021 bp
Thymine Count
807791 bp
Guanine Count
980050 bp
Cytosine Count
974960 bp
Genome Length
3570835 bp
Protein-coding Genes
3325 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shoct domain-containing protein | FAP39_00705 | Not Available | + | 157305 - 157511 | 7297.92 |
| sulfite exporter taue/safe family protein | FAP39_00710 | Not Available | + | 157596 - 158309 | 25249.4 |
| hypothetical protein | FAP39_00715 | Not Available | - | 158583 - 158894 | 10742.8 |
| coa ester lyase | FAP39_00720 | Not Available | + | 159080 - 159934 | 30362.5 |
| hypothetical protein | FAP39_00725 | Not Available | + | 159967 - 160515 | 19836.1 |
| duf1737 domain-containing protein | FAP39_00730 | Not Available | + | 160520 - 160723 | 7491.82 |
| maoc family dehydratase | FAP39_00735 | Not Available | + | 160725 - 161756 | 37585.6 |
| hypothetical protein | FAP39_00740 | Not Available | + | 161788 - 161985 | 7324.85 |
| succinate dehydrogenase, cytochrome b556 subunit | FAP39_00745 | Not Available | + | 162291 - 162674 | 13865.2 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | FAP39_00750 | Not Available | + | 162687 - 163058 | 13564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.