Escherichia coli strain Broiler parent55

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent55

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent55
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain Broiler parent55

SSQB00000000.1

Gene Summary

Adenine Count

1188419 bp

Thymine Count

1195152 bp

Guanine Count

1240353 bp

Cytosine Count

1228362 bp

Genome Length

4852414 bp

Protein-coding Genes

4455 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail completion proteinEYX78_01900Not Available-391499 - 39196617727.8
PeptidaseEYX78_01905Not Available-391953 - 3921326767.89
Duf2570 domain-containing proteinEYX78_01910Not Available-392104 - 39251114881.5
M15 family metallopeptidaseEYX78_01915Not Available-392508 - 39290014688.4
Holin family proteinEYX78_01920Not Available-392897 - 39322011376.8
Tail protein xEYX78_01925Not Available-393223 - 3934237479.97
Head completion/stabilization proteinEYX78_01930Not Available-393423 - 39391718447.6
Terminase endonuclease subunitEYX78_01935Not Available-394021 - 39482128897.5
Major capsid protein, p2 familyEYX78_01940Not Available-394867 - 39591939214.4
Capsid scaffolding proteinEYX78_01945Not Available-395943 - 39677930311.8

Displaying genes 31 – 40 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

10 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0010449N(6)-(D-ribulosyl)-L-lysineC11H23N2O6Chemical structure of N(6)-(D-ribulosyl)-L-lysineNot available
Average279.312Da
Monoisotopic279.1550629Da
BASm0010451N(6)-(3-O-phospho-D-ribulosyl)-L-lysineC11H22N2O9PChemical structure of N(6)-(3-O-phospho-D-ribulosyl)-L-lysineNot available
Average357.276Da
Monoisotopic357.1068409Da
BASm0010454N(6)-(D-erythrulosyl)-L-lysineC10H21N2O5Chemical structure of N(6)-(D-erythrulosyl)-L-lysineNot available
Average249.286Da
Monoisotopic249.1444982Da
BASm0010455N(6)-(3-O-phospho-D-erythrulosyl)-L-lysineC10H20N2O8PChemical structure of N(6)-(3-O-phospho-D-erythrulosyl)-L-lysineNot available
Average327.25Da
Monoisotopic327.09627619Da

Displaying 1–10 of 10 metabolites