Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Thiopseudomonas |
| Species | Thiopseudomonas denitrificans |
| Strain | strain DSM 28679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
576758 bp
Thymine Count
584960 bp
Guanine Count
850188 bp
Cytosine Count
819662 bp
Genome Length
2832987 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase erfk/srfk | DFQ45_10295 | Not Available | - | 538218 - 539138 | 33638.6 |
| hypothetical protein | DFQ45_10296 | Not Available | - | 539252 - 539548 | 11126.4 |
| l-aspartate aminotransferase | DFQ45_10297 | Not Available | + | 539841 - 541046 | 43226.4 |
| putative abc transport system permease protein | DFQ45_10298 | Not Available | - | 541113 - 543617 | 91216.2 |
| putative abc transport system atp-binding protein | DFQ45_10299 | Not Available | - | 543614 - 544291 | 24758.7 |
| acyl-coa thioesterase-1 | DFQ45_102100 | Not Available | + | 544302 - 544925 | 22444.1 |
| excinuclease abc subunit b | DFQ45_102101 | Not Available | + | 545005 - 547020 | 75854.5 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like protein | DFQ45_102102 | Not Available | - | 547047 - 549893 | 106103.0 |
| diguanylate cyclase (ggdef)-like protein | DFQ45_102103 | Not Available | - | 550040 - 552685 | 98749.6 |
| phospholipid-binding lipoprotein mlaa | DFQ45_102104 | Not Available | - | 552853 - 553620 | 29441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.