Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Hafnia alvei strain PCM_1221 861
Accession NumberSISX00000000.1
Gene Summary
Adenine Count
1273516 bp
Thymine Count
1270607 bp
Guanine Count
1207664 bp
Cytosine Count
1220036 bp
Genome Length
4972307 bp
Protein-coding Genes
4196 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | EYY91_02345 | Not Available | - | 532752 - 533243 | 18591.9 |
| ompa family protein | EYY91_02350 | Not Available | - | 533331 - 535040 | 62315.4 |
| dotu family type iv/vi secretion system protein | EYY91_02355 | Not Available | - | 535053 - 535712 | 24971.2 |
| type vi secretion system baseplate subunit tssk | EYY91_02360 | Not Available | - | 535709 - 537058 | 49796.1 |
| type vi secretion system contractile sheath large subunit | EYY91_02365 | Not Available | - | 537077 - 538630 | 57841.6 |
| type vi secretion system contractile sheath small subunit | EYY91_02370 | Not Available | - | 538656 - 539156 | 18482.1 |
| hypothetical protein | EYY91_02375 | Not Available | - | 540126 - 540770 | 24121.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EYY91_02380 | Not Available | - | 541335 - 541925 | 21700.9 |
| fumarate hydratase | EYY91_02385 | Not Available | - | 541942 - 543588 | 60894.5 |
| lysr family transcriptional regulator | EYY91_02390 | Not Available | - | 543750 - 544673 | 35675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.