Hafnia alvei strain PCM_1221 861

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei strain PCM_1221 861

Accession NumberSISX00000000.1

Gene Summary

Adenine Count

1273516 bp

Thymine Count

1270607 bp

Guanine Count

1207664 bp

Cytosine Count

1220036 bp

Genome Length

4972307 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

364 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rhs repeat proteinEYY91_17400Not Available-3744769 - 374690181227.5
hypothetical proteinEYY91_17405Not Available-3747255 - 374761413829.3
duf4150 domain-containing proteinEYY91_17410Not Available-3747616 - 3752187171520.0
duf2169 domain-containing proteinEYY91_17415Not Available-3752190 - 375336844392.1
type vi secretion system tip protein vgrgEYY91_17420Not Available-3753379 - 375537074277.1
hcp family type vi secretion system effectorEYY91_17425Not Available-3755586 - 375610419199.6
type vi secretion system contractile sheath small subunitEYY91_17430Not Available+3756789 - 375728918117.8
type vi secretion system contractile sheath large subunitEYY91_17435Not Available+3757309 - 375879355663.0
type vi secretion system baseplate subunit tsseEYY91_17440Not Available+3758798 - 375922016132.0
type vi secretion system baseplate subunit tssfEYY91_17445Not Available+3759226 - 376104970287.7

Displaying genes 3511 – 3520 of 4560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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