Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Hafnia alvei strain PCM_1221 861
Accession NumberSISX00000000.1
Gene Summary
Adenine Count
1273516 bp
Thymine Count
1270607 bp
Guanine Count
1207664 bp
Cytosine Count
1220036 bp
Genome Length
4972307 bp
Protein-coding Genes
4196 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dksa/trar family c4-type zinc finger protein | EYY91_16250 | Not Available | + | 3511177 - 3511443 | 9501.97 |
| amidohydrolase | EYY91_16255 | Not Available | - | 3511471 - 3512646 | 41728.6 |
| cytochrome c | EYY91_16260 | Not Available | + | 3513010 - 3514173 | 42574.8 |
| trimethylamine-n-oxide reductase tora | EYY91_16265 | Not Available | + | 3514186 - 3516702 | 92448.9 |
| type ii toxin-antitoxin system yafq family toxin | EYY91_16270 | Not Available | - | 3516796 - 3517065 | 10612.1 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | EYY91_16275 | Not Available | - | 3517101 - 3517361 | 9110.13 |
| sugar efflux transporter | EYY91_16280 | Not Available | + | 3517697 - 3518875 | 42753.8 |
| oxo-acid lyase | EYY91_16285 | Not Available | - | 3518960 - 3519703 | 25967.3 |
| dgae family pyridoxal phosphate-dependent ammonia lyase | EYY91_16290 | Not Available | - | 3519690 - 3520814 | 40570.0 |
| pts system mannose/fructose/sorbose family transporter subunit iid | EYY91_16295 | Not Available | - | 3520826 - 3521692 | 31049.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.