Hafnia alvei strain PCM_1221 861

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei strain PCM_1221 861

Accession NumberSISX00000000.1

Gene Summary

Adenine Count

1273516 bp

Thymine Count

1270607 bp

Guanine Count

1207664 bp

Cytosine Count

1220036 bp

Genome Length

4972307 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

364 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hcp family type vi secretion system effectorEYY91_04775Not Available-1075620 - 107613819110.6
reactive intermediate/imine deaminaseEYY91_04780Not Available-1076601 - 107787245258.4
phosphatidylglycerophosphatase aEYY91_04785Not Available-1078356 - 107887719543.4
thiamine-phosphate kinaseEYY91_04790Not Available-1078864 - 107984135137.6
transcription antitermination factor nusbEYY91_04795Not Available-1079981 - 108040015763.9
6,7-dimethyl-8-ribityllumazine synthaseEYY91_04800Not Available-1080421 - 108089116212.6
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdEYY91_04805Not Available-1081062 - 108218640714.1
transcriptional regulator nrdrEYY91_04810Not Available-1082246 - 108269517092.7
duf3251 domain-containing proteinEYY91_04815Not Available+1083048 - 108358119321.1
protein translocase subunit secfEYY91_04820Not Available-1083664 - 108463535325.7

Displaying genes 1231 – 1240 of 4560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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