Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus wooponensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus wooponensis strain 03SU3-P J_8
Accession NumberRWJI00000000.1
Gene Summary
Adenine Count
495683 bp
Thymine Count
494372 bp
Guanine Count
592940 bp
Cytosine Count
594960 bp
Genome Length
2178496 bp
Protein-coding Genes
2022 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | D7D48_04870 | Not Available | - | 973228 - 974214 | 34366.6 |
| saccharopine dehydrogenase family protein | D7D48_04875 | Not Available | + | 974269 - 975477 | 44437.1 |
| carboxynorspermidine decarboxylase | D7D48_04880 | Not Available | + | 975477 - 976631 | 42528.4 |
| type iii plp-dependent enzyme | D7D48_04885 | Not Available | + | 976759 - 977964 | 43870.1 |
| mapeg family protein | D7D48_04890 | Not Available | + | 978030 - 978458 | 15253.0 |
| mapeg family protein | D7D48_04895 | Not Available | + | 978470 - 978913 | 15950.8 |
| class i sam-dependent rna methyltransferase | D7D48_04900 | Not Available | - | 978910 - 980109 | 43505.2 |
| dihydroxy-acid dehydratase | D7D48_04905 | Not Available | - | 980152 - 981873 | 60739.8 |
| n-formylglutamate amidohydrolase | D7D48_04910 | Not Available | - | 981909 - 982646 | 27108.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D7D48_04915 | Not Available | - | 982643 - 983473 | 29314.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.