Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus wooponensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus wooponensis strain 03SU3-P J_8
Accession NumberRWJI00000000.1
Gene Summary
Adenine Count
495683 bp
Thymine Count
494372 bp
Guanine Count
592940 bp
Cytosine Count
594960 bp
Genome Length
2178496 bp
Protein-coding Genes
2022 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | D7D48_04670 | Not Available | + | 925593 - 926993 | 50826.8 |
| rna chaperone hfq | D7D48_04675 | Not Available | + | 927109 - 927606 | 18533.4 |
| gtpase hflx | D7D48_04680 | Not Available | + | 927603 - 928940 | 49634.5 |
| nucleoside triphosphate pyrophosphohydrolase | D7D48_04685 | Not Available | - | 928956 - 929714 | 28258.1 |
| tigr02281 family clan aa aspartic protease | D7D48_04690 | Not Available | - | 929807 - 930403 | 21623.4 |
| tatd family deoxyribonuclease | D7D48_04695 | Not Available | - | 930400 - 931176 | 28543.6 |
| methionine--trna ligase | D7D48_04700 | Not Available | - | 931176 - 932744 | 58428.2 |
| dna polymerase iii subunit delta' | D7D48_04705 | Not Available | - | 932763 - 933728 | 35008.9 |
| dtmp kinase | D7D48_04710 | Not Available | - | 933725 - 934372 | 23189.6 |
| lytic murein transglycosylase | D7D48_04715 | Not Available | - | 934514 - 935560 | 38473.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.