Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus wooponensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus wooponensis strain 03SU3-P J_8
Accession NumberRWJI00000000.1
Gene Summary
Adenine Count
495683 bp
Thymine Count
494372 bp
Guanine Count
592940 bp
Cytosine Count
594960 bp
Genome Length
2178496 bp
Protein-coding Genes
2022 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | D7D48_04620 | Not Available | - | 915280 - 915591 | 11033.4 |
| sodium-dependent bicarbonate transport family permease | D7D48_04625 | Not Available | - | 915596 - 916549 | 32547.9 |
| lipoyl synthase | D7D48_04630 | Not Available | + | 916631 - 917557 | 34282.5 |
| type ii toxin-antitoxin system rata family toxin | D7D48_04635 | Not Available | + | 917573 - 918031 | 17192.3 |
| cina family protein | D7D48_04640 | Not Available | - | 917995 - 918507 | 16995.4 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | D7D48_04645 | Not Available | - | 918510 - 919652 | 40672.6 |
| trna dihydrouridine synthase dusb | D7D48_04650 | Not Available | + | 919735 - 920730 | 36610.6 |
| pas domain-containing sensor histidine kinase | D7D48_04655 | Not Available | + | 920734 - 921825 | 39814.9 |
| response regulator | D7D48_04660 | Not Available | + | 921822 - 923243 | 51902.3 |
| hamp domain-containing protein | D7D48_04665 | Not Available | + | 923326 - 925590 | 82286.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.