Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus wooponensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus wooponensis strain 03SU3-P J_8
Accession NumberRWJI00000000.1
Gene Summary
Adenine Count
495683 bp
Thymine Count
494372 bp
Guanine Count
592940 bp
Cytosine Count
594960 bp
Genome Length
2178496 bp
Protein-coding Genes
2022 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | D7D48_05920 | Not Available | - | 1193145 - 1195082 | 71259.7 |
| Trna-tyr | Not Available | Not Available | + | 1195327 - 1195412 | Not Available |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | D7D48_05930 | Not Available | + | 1195558 - 1196319 | 27224.4 |
| dna-3-methyladenine glycosylase 2 family protein | D7D48_05935 | Not Available | + | 1196329 - 1196952 | 22308.9 |
| sdr family oxidoreductase | D7D48_05940 | Not Available | + | 1197030 - 1197851 | 29258.9 |
| 4a-hydroxytetrahydrobiopterin dehydratase | D7D48_05945 | Not Available | - | 1197838 - 1198131 | 10955.9 |
| heme abc exporter atp-binding protein ccma | D7D48_05950 | Not Available | + | 1198181 - 1198792 | 21323.8 |
| heme abc transporter permease ccmb | D7D48_05955 | Not Available | + | 1198789 - 1199436 | 21755.5 |
| sdr family nad(p)-dependent oxidoreductase | D7D48_05960 | Not Available | - | 1199448 - 1200272 | 28549.2 |
| nifu family protein | D7D48_05965 | Not Available | + | 1200370 - 1200945 | 20211.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.