Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus wooponensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus wooponensis strain 03SU3-P J_8
Accession NumberRWJI00000000.1
Gene Summary
Adenine Count
495683 bp
Thymine Count
494372 bp
Guanine Count
592940 bp
Cytosine Count
594960 bp
Genome Length
2178496 bp
Protein-coding Genes
2022 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid dehydrogenase | D7D48_05770 | Not Available | - | 1163457 - 1164488 | 35360.2 |
| Trna-his | Not Available | Not Available | + | 1164597 - 1164673 | Not Available |
| 50s ribosomal protein l31 | D7D48_05780 | Not Available | - | 1164770 - 1164997 | 8265.84 |
| 3-hydroxyacyl-acp dehydratase fabz | D7D48_05785 | Not Available | - | 1165195 - 1165656 | 16739.8 |
| omph family outer membrane protein | D7D48_05790 | Not Available | - | 1165662 - 1166357 | 24383.2 |
| outer membrane protein assembly factor bama | D7D48_05795 | Not Available | - | 1166357 - 1169032 | 99655.6 |
| rip metalloprotease rsep | D7D48_05800 | Not Available | - | 1169133 - 1170227 | 39613.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D7D48_05805 | Not Available | - | 1170244 - 1171410 | 40753.1 |
| phosphatidate cytidylyltransferase | D7D48_05810 | Not Available | - | 1171415 - 1172152 | 25571.9 |
| di-trans,poly-cis-decaprenylcistransferase | D7D48_05815 | Not Available | - | 1172149 - 1172817 | 24925.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.