Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus wooponensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus wooponensis strain 03SU3-P J_8
Accession NumberRWJI00000000.1
Gene Summary
Adenine Count
495683 bp
Thymine Count
494372 bp
Guanine Count
592940 bp
Cytosine Count
594960 bp
Genome Length
2178496 bp
Protein-coding Genes
2022 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | D7D48_05520 | Not Available | - | 1109512 - 1110414 | 31723.4 |
| thymidine kinase | D7D48_05525 | Not Available | - | 1110421 - 1111002 | 20831.9 |
| 30s ribosome-binding factor rbfa | D7D48_05530 | Not Available | - | 1111002 - 1111430 | 15574.6 |
| translation initiation factor if-2 | D7D48_05535 | Not Available | - | 1111460 - 1114012 | 91627.8 |
| duf448 domain-containing protein | D7D48_05540 | Not Available | - | 1114034 - 1114795 | 27066.5 |
| transcription termination/antitermination protein nusa | D7D48_05545 | Not Available | - | 1114722 - 1116332 | 59556.6 |
| ribosome maturation protein rimp | D7D48_05550 | Not Available | - | 1116336 - 1116896 | 20317.6 |
| pqq-dependent sugar dehydrogenase | D7D48_05555 | Not Available | + | 1117069 - 1118217 | 40976.7 |
| duf1499 domain-containing protein | D7D48_05560 | Not Available | - | 1118237 - 1119109 | 31226.5 |
| n-acetyltransferase | D7D48_05565 | Not Available | + | 1119253 - 1119732 | 17484.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.