Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0347 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1243280 bp
Thymine Count
1247611 bp
Guanine Count
1271407 bp
Cytosine Count
1294199 bp
Genome Length
5063882 bp
Protein-coding Genes
4602 genes
Non-Coding Genes
310 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | C9123_21325 | Not Available | Negative | 4386320 - 4386838 | 19256.8 |
| type vi secretion system contractile sheath small subunit | C9123_21330 | Not Available | Positive | 4387535 - 4388035 | 18062.5 |
| hypothetical protein | C9123_21335 | Not Available | Positive | 4388070 - 4388294 | 8411.01 |
| type vi secretion system contractile sheath large subunit | C9123_21340 | Not Available | Positive | 4388345 - 4389820 | 55705.0 |
| type vi secretion system baseplate subunit tsse | C9123_21345 | Not Available | Positive | 4389827 - 4390240 | 15494.0 |
| type vi secretion system baseplate subunit tssf | C9123_21350 | Not Available | Positive | 4390244 - 4392094 | 71190.0 |
| type vi secretion system baseplate subunit tssg | C9123_21355 | Not Available | Positive | 4392058 - 4393140 | 40262.1 |
| type vi secretion system-associated fha domain protein tagh | C9123_21360 | Not Available | Positive | 4393165 - 4394445 | 47398.8 |
| type vi secretion system lipoprotein tssj | C9123_21365 | Not Available | Positive | 4394442 - 4394966 | 19395.0 |
| type vi secretion system baseplate subunit tssk | C9123_21370 | Not Available | Positive | 4394969 - 4396300 | 49910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





