Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea opalescens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amphritea opalescens strain ANRC-JH13
Accession NumberRQXW00000000.1
Gene Summary
Adenine Count
1045600 bp
Thymine Count
1078682 bp
Guanine Count
1024688 bp
Cytosine Count
975932 bp
Genome Length
4127332 bp
Protein-coding Genes
3581 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EH243_12335 | Not Available | - | 2758498 - 2759796 | 48696.1 |
| methionyl-trna formyltransferase | EH243_12340 | Not Available | - | 2759793 - 2760758 | 34197.2 |
| peptide deformylase | EH243_12345 | Not Available | - | 2760762 - 2761268 | 19289.2 |
| lysm domain-containing protein | EH243_12350 | Not Available | + | 2761411 - 2762454 | 38423.5 |
| dna-protecting protein dpra | EH243_12355 | Not Available | + | 2762490 - 2763632 | 41020.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EH243_12360 | Not Available | + | 2763746 - 2764258 | 17596.2 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | EH243_12365 | Not Available | + | 2764264 - 2764821 | 20612.7 |
| oxygen-dependent coproporphyrinogen oxidase | EH243_12370 | Not Available | + | 2764875 - 2765789 | 34614.5 |
| shikimate dehydrogenase | EH243_12375 | Not Available | + | 2765791 - 2766627 | 30171.9 |
| atp-binding protein | EH243_12380 | Not Available | + | 2766711 - 2769086 | 88748.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.