Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | EDC56_1218 | Not Available | - | 1394642 - 1395142 | 17942.8 |
| Putative tail sheath protein | EDC56_1219 | Not Available | - | 1395139 - 1396518 | 49983.8 |
| Virion structural protein | EDC56_1220 | Not Available | - | 1396608 - 1399088 | 88055.6 |
| Tail fibers protein | EDC56_1221 | Not Available | - | 1399134 - 1400060 | 34661.8 |
| Baseplate assembly protein j | EDC56_1222 | Not Available | - | 1400063 - 1400971 | 33471.4 |
| Gp39, phage baseplate assembly protein | EDC56_1223 | Not Available | - | 1401015 - 1401923 | 33975.3 |
| Baseplate assembly protein | EDC56_1224 | Not Available | - | 1401968 - 1402312 | 12767.6 |
| Attl | Not Available | Not Available | + | 1428812 - 1428834 | Not Available |
| Hypothetical protein | EDC56_1247 | Not Available | - | 1430345 - 1430863 | 18988.8 |
| hypothetical protein | EDC56_1248 | Not Available | - | 1430847 - 1431203 | 12755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
