Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | BCL90_0056 | Not Available | + | 95832 - 97894 | 78754.9 |
| hypothetical protein | BCL90_0058 | Not Available | - | 98196 - 99065 | 30951.1 |
| Ncrna_class:other | Not Available | Not Available | + | 99710 - 99785 | Not Available |
| subtilase family protein | BCL90_0068 | Not Available | + | 105642 - 107414 | 66198.3 |
| Ncrna_class:other | Not Available | Not Available | + | 106183 - 106244 | Not Available |
| uncharacterized protein duf3473 | BCL90_0069 | Not Available | - | 107585 - 108358 | 30398.6 |
| dolichol-phosphate mannosyltransferase | BCL90_0070 | Not Available | - | 108366 - 109298 | 35530.2 |
| uncharacterized protein duf2029 | BCL90_0071 | Not Available | - | 109295 - 110479 | 45008.0 |
| alpha-l-arabinofuranosidase | BCL90_0072 | Not Available | - | 110674 - 113250 | 95959.8 |
| k+-transporting atpase atpase a chain | BCL90_0073 | Not Available | + | 113997 - 115715 | 62267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
