Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase family protein | BCL90_0021 | Not Available | + | 27851 - 28555 | 26667.1 |
| hypothetical protein | BCL90_0022 | Not Available | + | 29127 - 29570 | 17574.4 |
| hypothetical protein | BCL90_0023 | Not Available | + | 29705 - 30385 | 26845.6 |
| hypothetical protein | BCL90_0024 | Not Available | + | 30583 - 31533 | 36530.5 |
| hypothetical protein | BCL90_0025 | Not Available | + | 31628 - 32710 | 41681.7 |
| hypothetical protein | BCL90_0026 | Not Available | - | 32646 - 32861 | 8148.29 |
| lyttr family two component transcriptional regulator | BCL90_0027 | Not Available | - | 33582 - 34280 | 26510.8 |
| amino acid adenylation domain-containing protein | BCL90_0030 | Not Available | - | 34779 - 46996 | 463551.0 |
| ectoine hydroxylase | BCL90_0031 | Not Available | - | 47034 - 47846 | 30880.6 |
| Ncrna_class:other | Not Available | Not Available | + | 49764 - 49838 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
