Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | + | 8721 - 8782 | Not Available |
| pimeloyl-acp methyl ester carboxylesterase | BCL90_0006 | Not Available | - | 7993 - 8904 | 33695.8 |
| non-heme chloroperoxidase | BCL90_0007 | Not Available | - | 9040 - 9861 | 30814.3 |
| Ncrna_class:other | Not Available | Not Available | + | 10302 - 10402 | Not Available |
| starvation-inducible dna-binding protein | BCL90_0008 | Not Available | - | 9974 - 10444 | 18159.7 |
| Ncrna_class:other | Not Available | Not Available | + | 10563 - 10663 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 10810 - 10899 | Not Available |
| hypothetical protein | BCL90_0009 | Not Available | - | 11029 - 11208 | 6957.54 |
| transcriptional regulator with gaf, atpase, and fis domain | BCL90_0010 | Not Available | + | 11433 - 13370 | 72057.3 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 11904 - 12003 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
