Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_0160 | Not Available | + | 214312 - 214707 | 14659.4 |
| hypothetical protein | BCL90_0161 | Not Available | + | 214816 - 215211 | 14536.1 |
| uncharacterized protein involved in type vi secretion and phage assembly | BCL90_0162 | Not Available | + | 215505 - 217244 | 63971.1 |
| hypothetical protein | BCL90_0163 | Not Available | + | 217278 - 218108 | 32254.4 |
| hypothetical protein | BCL90_0164 | Not Available | + | 218101 - 219552 | 52200.5 |
| hypothetical protein | BCL90_0165 | Not Available | + | 219545 - 220468 | 35981.3 |
| Ncrna_class:other | Not Available | Not Available | + | 220481 - 220558 | Not Available |
| hypothetical protein | BCL90_0166 | Not Available | + | 220676 - 220978 | 11755.9 |
| Ncrna_class:other | Not Available | Not Available | + | 220972 - 221049 | Not Available |
| immunity protein imm5 of predicted polymorphic toxin system | BCL90_0167 | Not Available | + | 221156 - 222256 | 43874.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
