Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | BCL90_0149 | Not Available | - | 203714 - 204664 | 36010.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_0150 | Not Available | - | 204757 - 205353 | 23624.4 |
| arac family transcriptional regulator | BCL90_0152 | Not Available | + | 205741 - 206658 | 35555.5 |
| hypothetical protein | BCL90_0153 | Not Available | - | 206887 - 207486 | 23522.7 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_0154 | Not Available | - | 207483 - 207995 | 19936.0 |
| pimeloyl-acp methyl ester carboxylesterase | BCL90_0155 | Not Available | - | 208004 - 208879 | 32433.4 |
| pas domain s-box-containing protein | BCL90_0156 | Not Available | + | 209261 - 211669 | 90716.1 |
| cytochrome b561 | BCL90_0157 | Not Available | - | 211814 - 212428 | 23251.1 |
| cation diffusion facilitator family transporter | BCL90_0158 | Not Available | - | 212435 - 213322 | 32566.8 |
| hypothetical protein | BCL90_0159 | Not Available | - | 213398 - 213925 | 19861.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
