Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_0129 | Not Available | + | 182766 - 183170 | 15636.8 |
| Ncrna_class:other | Not Available | Not Available | + | 184959 - 185024 | Not Available |
| hypothetical protein | BCL90_0132 | Not Available | + | 185562 - 185873 | 11876.0 |
| hypothetical protein | BCL90_0133 | Not Available | + | 186179 - 186799 | 22464.5 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_0134 | Not Available | - | 186948 - 188087 | 41907.8 |
| hypothetical protein | BCL90_0135 | Not Available | - | 188035 - 189078 | 38208.0 |
| hypothetical protein | BCL90_0136 | Not Available | - | 189087 - 189470 | 14801.0 |
| hypothetical protein | BCL90_0137 | Not Available | - | 189514 - 189732 | 8122.59 |
| Ncrna_class:other | Not Available | Not Available | + | 189862 - 189931 | Not Available |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | BCL90_0138 | Not Available | - | 189758 - 190591 | 32153.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
