Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative sulfatase | BCL90_0100 | Not Available | + | 146138 - 148159 | 76944.8 |
| hypothetical protein | BCL90_0101 | Not Available | - | 148160 - 149326 | 45426.6 |
| yaio family outer membrane protein | BCL90_0102 | Not Available | - | 149326 - 150567 | 47047.4 |
| gaf domain-containing protein | BCL90_0103 | Not Available | - | 150599 - 151804 | 44415.6 |
| outer membrane protein tolc | BCL90_0104 | Not Available | + | 154293 - 155684 | 51455.4 |
| multidrug efflux pump subunit acrb | BCL90_0105 | Not Available | + | 155698 - 158913 | 117153.0 |
| rnd family efflux transporter mfp subunit | BCL90_0106 | Not Available | + | 158927 - 160006 | 39109.1 |
| hypothetical protein | BCL90_0107 | Not Available | + | 160345 - 160605 | 10491.0 |
| hypothetical protein | BCL90_0108 | Not Available | - | 160713 - 160868 | 6467.04 |
| hypothetical protein | BCL90_0109 | Not Available | - | 160905 - 162548 | 62340.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
