Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative dehydrogenase | BCL90_0090 | Not Available | + | 134329 - 135417 | 39807.2 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_0091 | Not Available | + | 135772 - 136836 | 40270.1 |
| Ncrna_class:other | Not Available | Not Available | + | 136740 - 136858 | Not Available |
| two-component system cheb/cher fusion protein | BCL90_0092 | Not Available | + | 137218 - 140757 | 133022.0 |
| hypothetical protein | BCL90_0093 | Not Available | + | 140774 - 140884 | 4182.33 |
| putative cold-shock dna-binding protein | BCL90_0094 | Not Available | - | 140871 - 141062 | 6887.11 |
| outer membrane protein with beta-barrel domain | BCL90_0096 | Not Available | + | 141942 - 142571 | 21966.3 |
| response regulator receiver domain-containing protein | BCL90_0097 | Not Available | + | 143291 - 143653 | 13659.7 |
| hypothetical protein | BCL90_0098 | Not Available | + | 143650 - 144714 | 41067.5 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | BCL90_0099 | Not Available | + | 144708 - 146141 | 54557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
