Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| k+-transporting atpase atpase b chain | BCL90_0074 | Not Available | + | 115868 - 117895 | 71825.6 |
| Ncrna_class:other | Not Available | Not Available | + | 116441 - 116509 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 116565 - 116630 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 116920 - 116979 | Not Available |
| k+-transporting atpase atpase c chain | BCL90_0075 | Not Available | + | 118028 - 118588 | 19877.5 |
| putative ompl-like beta-barrel porin-2 | BCL90_0076 | Not Available | + | 118816 - 119886 | 39112.1 |
| hypothetical protein | BCL90_0077 | Not Available | + | 120019 - 120267 | 9782.73 |
| two-component system sensor histidine kinase kdpd | BCL90_0078 | Not Available | + | 120273 - 121403 | 42929.5 |
| hypothetical protein | BCL90_0079 | Not Available | + | 121456 - 121854 | 14489.2 |
| Ncrna_class:other | Not Available | Not Available | + | 122584 - 122677 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
