Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | + | 49893 - 49960 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 54424 - 54489 | Not Available |
| amino acid adenylation domain-containing protein | BCL90_0032 | Not Available | - | 47871 - 57563 | 363582.0 |
| amino acid adenylation domain-containing protein | BCL90_0033 | Not Available | - | 57652 - 68331 | 403921.0 |
| phosphopantetheine binding protein | BCL90_0034 | Not Available | - | 68344 - 68658 | 11735.2 |
| beta-barrel assembly machine subunit bamd | BCL90_0036 | Not Available | + | 69644 - 70591 | 36153.9 |
| rna polymerase rpb6 | BCL90_0037 | Not Available | + | 70595 - 70921 | 12517.7 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | BCL90_0038 | Not Available | + | 71000 - 72196 | 43130.7 |
| uncharacterized protein duf4835 | BCL90_0039 | Not Available | + | 72193 - 73086 | 33396.6 |
| putative transcriptional regulator | BCL90_0040 | Not Available | + | 73506 - 73877 | 13995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
