Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5304 | Not Available | - | 6027005 - 6027652 | 24792.2 |
| histidine kinase/dna gyrase b/hsp90-like atpase | BCL90_5305 | Not Available | - | 6027700 - 6029859 | 83616.7 |
| uncharacterized protein duf4209 | BCL90_5306 | Not Available | + | 6029987 - 6031861 | 72241.4 |
| hypothetical protein | BCL90_5307 | Not Available | + | 6031864 - 6032349 | 18451.9 |
| hypothetical protein | BCL90_5308 | Not Available | + | 6032294 - 6032749 | 17310.2 |
| rimj/riml family protein n-acetyltransferase | BCL90_5309 | Not Available | + | 6032914 - 6033468 | 21206.5 |
| hypothetical protein | BCL90_5310 | Not Available | + | 6033614 - 6034375 | 30644.9 |
| helix-turn-helix protein | BCL90_5311 | Not Available | + | 6034527 - 6034799 | 10518.8 |
| helix-turn-helix protein | BCL90_5312 | Not Available | + | 6034818 - 6035081 | 10155.6 |
| hypothetical protein | BCL90_5313 | Not Available | + | 6035078 - 6035383 | 11443.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
