Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5269 | Not Available | - | 5988545 - 5989234 | 26463.2 |
| immunity protein 51 of polymorphic toxin system | BCL90_5270 | Not Available | - | 5989551 - 5989901 | 13469.8 |
| immunity protein 26 of polymorphic toxin system | BCL90_5271 | Not Available | - | 5990014 - 5990520 | 19199.1 |
| hypothetical protein | BCL90_5273 | Not Available | - | 5991258 - 5991575 | 12504.0 |
| hypothetical protein | BCL90_5274 | Not Available | - | 5991768 - 5992343 | 21682.1 |
| hypothetical protein | BCL90_5275 | Not Available | - | 5992346 - 5992714 | 13438.5 |
| hypothetical protein | BCL90_5277 | Not Available | - | 5993237 - 5993893 | 25716.0 |
| hypothetical protein | BCL90_5278 | Not Available | - | 5994197 - 5994751 | 21565.1 |
| rhs repeat-associated protein | BCL90_5279 | Not Available | - | 5994762 - 5998919 | 155249.0 |
| hypothetical protein | BCL90_5280 | Not Available | - | 5998938 - 5999273 | 12705.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
