Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5257 | Not Available | - | 5978928 - 5979485 | 22193.1 |
| intein | BCL90_5258 | Not Available | - | 5979494 - 5980930 | 52195.9 |
| uncharacterized protein involved in type vi secretion and phage assembly | BCL90_5259 | Not Available | - | 5980936 - 5982774 | 66494.1 |
| hypothetical protein | BCL90_5260 | Not Available | - | 5982975 - 5983427 | 17179.5 |
| hypothetical protein | BCL90_5261 | Not Available | - | 5983473 - 5984333 | 32692.1 |
| hypothetical protein | BCL90_5262 | Not Available | - | 5984392 - 5984787 | 14556.2 |
| hypothetical protein | BCL90_5263 | Not Available | - | 5984915 - 5985310 | 14686.5 |
| hypothetical protein | BCL90_5264 | Not Available | - | 5985733 - 5985912 | 6877.23 |
| short-subunit dehydrogenase | BCL90_5265 | Not Available | + | 5986571 - 5987389 | 29637.7 |
| hypothetical protein | BCL90_5268 | Not Available | - | 5987813 - 5988406 | 23246.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
