Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5247 | Not Available | + | 5962422 - 5963699 | 49395.8 |
| uncharacterized protein duf4433 | BCL90_5248 | Not Available | + | 5963750 - 5968882 | 195691.0 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii) | BCL90_5249 | Not Available | + | 5968885 - 5969352 | 17930.0 |
| uncharacterized protein yjbi with pentapeptide repeats | BCL90_5250 | Not Available | + | 5969648 - 5971186 | 58699.1 |
| hypothetical protein | BCL90_5251 | Not Available | + | 5971592 - 5972374 | 30535.1 |
| uncharacterized protein duf4365 | BCL90_5252 | Not Available | + | 5972605 - 5975352 | 107680.0 |
| hypothetical protein | BCL90_5253 | Not Available | - | 5975680 - 5976513 | 32430.9 |
| hypothetical protein | BCL90_5254 | Not Available | - | 5977132 - 5977773 | 23897.8 |
| cell wall assembly regulator smi1 | BCL90_5255 | Not Available | - | 5977914 - 5978468 | 22075.9 |
| hypothetical protein | BCL90_5256 | Not Available | - | 5978792 - 5978914 | 4619.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
