Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5237 | Not Available | - | 5954050 - 5954217 | 6422.15 |
| hypothetical protein | BCL90_5238 | Not Available | - | 5954337 - 5954480 | 5270.67 |
| transposase-like zinc ribbon protein | BCL90_5239 | Not Available | - | 5954477 - 5955445 | 36834.5 |
| putative zn-dependent protease duf2268 | BCL90_5240 | Not Available | + | 5955902 - 5957164 | 47303.6 |
| trypsin-like peptidase | BCL90_5241 | Not Available | - | 5957932 - 5958939 | 36701.6 |
| hypothetical protein | BCL90_5242 | Not Available | - | 5958951 - 5959274 | 12987.4 |
| hypothetical protein | BCL90_5243 | Not Available | - | 5959443 - 5959694 | 9606.75 |
| hypothetical protein | BCL90_5244 | Not Available | + | 5959720 - 5960001 | 11183.8 |
| integrase-like protein | BCL90_5245 | Not Available | - | 5959975 - 5960553 | 22597.2 |
| excisionase family dna binding protein | BCL90_5246 | Not Available | - | 5960560 - 5961120 | 21547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
