Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BCL90_5226 | Not Available | + | 5944090 - 5945058 | 37147.6 |
| hypothetical protein | BCL90_5228 | Not Available | - | 5946366 - 5946815 | 15989.5 |
| hypothetical protein | BCL90_5229 | Not Available | + | 5947148 - 5947291 | 5503.74 |
| histidine kinase/dna gyrase b/hsp90-like atpase | BCL90_5230 | Not Available | - | 5947391 - 5949382 | 75268.9 |
| hypothetical protein | BCL90_5231 | Not Available | + | 5949686 - 5950627 | 35510.3 |
| ompa family protein | BCL90_5232 | Not Available | + | 5950653 - 5951669 | 37242.4 |
| hypothetical protein | BCL90_5233 | Not Available | + | 5951772 - 5952314 | 19562.2 |
| hypothetical protein | BCL90_5234 | Not Available | - | 5952635 - 5952823 | 7090.68 |
| hypothetical protein | BCL90_5235 | Not Available | + | 5953082 - 5953552 | 17791.1 |
| hypothetical protein | BCL90_5236 | Not Available | + | 5953557 - 5954114 | 21505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
