Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (tigr02284 family) | BCL90_5184 | Not Available | + | 5894785 - 5895243 | 16856.8 |
| alkanesulfonate monooxygenase ssud/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (luciferase family) | BCL90_5185 | Not Available | + | 5895957 - 5897009 | 38730.9 |
| hypothetical protein | BCL90_5186 | Not Available | + | 5897636 - 5898274 | 22965.4 |
| hypothetical protein | BCL90_5187 | Not Available | + | 5898631 - 5899194 | 20897.8 |
| hypothetical protein | BCL90_5188 | Not Available | + | 5899181 - 5899666 | 18390.1 |
| crp-like camp-binding protein | BCL90_5189 | Not Available | + | 5899812 - 5900399 | 22164.6 |
| hypothetical protein | BCL90_5190 | Not Available | + | 5900466 - 5901128 | 24474.9 |
| glycerophosphoryl diester phosphodiesterase | BCL90_5191 | Not Available | - | 5901258 - 5902082 | 30339.8 |
| putative mpp superfamily phosphohydrolase | BCL90_5192 | Not Available | - | 5902079 - 5903371 | 49008.6 |
| susd-like starch-binding protein associating with outer membrane | BCL90_5193 | Not Available | - | 5903396 - 5904868 | 55285.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
