Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5174 | Not Available | + | 5880479 - 5880715 | 8840.87 |
| putative secreted protein (por secretion system target) | BCL90_5175 | Not Available | - | 5881159 - 5883393 | 81316.8 |
| hypothetical protein | BCL90_5176 | Not Available | - | 5884645 - 5884923 | 10207.9 |
| hypothetical protein | BCL90_5177 | Not Available | - | 5885856 - 5886179 | 12537.4 |
| hypothetical protein | BCL90_5178 | Not Available | - | 5886209 - 5887033 | 31438.6 |
| tonb-dependent receptor | BCL90_5179 | Not Available | - | 5887044 - 5890388 | 125419.0 |
| fecr family protein | BCL90_5180 | Not Available | - | 5890563 - 5891573 | 37953.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_5181 | Not Available | - | 5891752 - 5892339 | 22962.0 |
| uncharacterized membrane protein ycap (duf421 family) | BCL90_5182 | Not Available | + | 5893302 - 5893991 | 25732.6 |
| uncharacterized protein duf4385 | BCL90_5183 | Not Available | - | 5894195 - 5894683 | 19153.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
