Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein involved in fe transport | BCL90_5164 | Not Available | + | 5869823 - 5873044 | 120847.0 |
| hypothetical protein | BCL90_5165 | Not Available | + | 5873471 - 5874847 | 47363.2 |
| hypothetical protein | BCL90_5166 | Not Available | - | 5874819 - 5874929 | 4306.35 |
| hypothetical protein | BCL90_5167 | Not Available | + | 5874933 - 5876042 | 40610.1 |
| hypothetical protein | BCL90_5168 | Not Available | + | 5876756 - 5877079 | 12639.0 |
| hypothetical protein | BCL90_5169 | Not Available | + | 5877036 - 5877356 | 12045.8 |
| hypothetical protein | BCL90_5170 | Not Available | + | 5877346 - 5877498 | 5787.15 |
| acetyltransferase (gnat) family protein | BCL90_5171 | Not Available | + | 5877662 - 5878243 | 22396.7 |
| hypothetical protein | BCL90_5172 | Not Available | + | 5878247 - 5878675 | 16785.9 |
| hypothetical protein | BCL90_5173 | Not Available | + | 5878899 - 5879807 | 35871.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
