Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5142 | Not Available | + | 5843171 - 5843842 | 24531.9 |
| flavin-dependent dehydrogenase | BCL90_5143 | Not Available | - | 5844209 - 5845324 | 41400.0 |
| hypothetical protein | BCL90_5144 | Not Available | - | 5845321 - 5847264 | 72032.6 |
| berberine-like enzyme | BCL90_5145 | Not Available | - | 5847492 - 5849264 | 67488.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | BCL90_5146 | Not Available | - | 5849894 - 5851063 | 43667.1 |
| arac-like dna-binding protein | BCL90_5147 | Not Available | - | 5851086 - 5851835 | 28655.5 |
| hxlr family transcriptional regulator | BCL90_5149 | Not Available | - | 5853046 - 5853465 | 15800.4 |
| nad(p)h dehydrogenase (quinone) | BCL90_5150 | Not Available | + | 5853574 - 5854494 | 33411.2 |
| hypothetical protein | BCL90_5151 | Not Available | + | 5854778 - 5855836 | 37325.8 |
| peptidase s41-like protein | BCL90_5152 | Not Available | - | 5856210 - 5857826 | 61608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
