Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two component regulator with propeller domain | BCL90_5132 | Not Available | + | 5825874 - 5830001 | 156892.0 |
| tonb-linked susc/raga family outer membrane protein | BCL90_5133 | Not Available | + | 5830230 - 5833412 | 115558.0 |
| putative outer membrane starch-binding protein | BCL90_5134 | Not Available | + | 5833418 - 5835124 | 63261.7 |
| o-glycosyl hydrolase | BCL90_5135 | Not Available | + | 5835139 - 5836662 | 56900.7 |
| beta-galactosidase | BCL90_5136 | Not Available | + | 5836792 - 5838633 | 69208.7 |
| crp-like camp-binding protein | BCL90_5137 | Not Available | - | 5838856 - 5839470 | 23797.8 |
| hypothetical protein | BCL90_5138 | Not Available | + | 5839759 - 5839884 | 4615.83 |
| Trna-lys | Not Available | Not Available | + | 5839883 - 5839958 | Not Available |
| dipeptidyl peptidase iv (dpp iv)-like protein | BCL90_5140 | Not Available | + | 5840195 - 5842540 | 87738.3 |
| hypothetical protein | BCL90_5141 | Not Available | + | 5842937 - 5843035 | 3743.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
