Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | BCL90_5112 | Not Available | + | 5797304 - 5798827 | 56758.8 |
| alkaline phosphatase | BCL90_5113 | Not Available | + | 5798821 - 5800686 | 68278.2 |
| chey-like chemotaxis protein | BCL90_5114 | Not Available | + | 5801032 - 5801412 | 14452.3 |
| hypothetical protein | BCL90_5115 | Not Available | + | 5801421 - 5801888 | 17928.0 |
| xaa-pro aminopeptidase | BCL90_5116 | Not Available | + | 5802010 - 5803785 | 65701.8 |
| hypothetical protein | BCL90_5117 | Not Available | + | 5803812 - 5804045 | 8562.6 |
| hypothetical protein | BCL90_5118 | Not Available | + | 5804511 - 5807276 | 103230.0 |
| xaa-pro aminopeptidase | BCL90_5119 | Not Available | + | 5807867 - 5809264 | 52193.5 |
| peptidase m1-like protein | BCL90_5120 | Not Available | + | 5809772 - 5811442 | 63721.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BCL90_5121 | Not Available | + | 5811778 - 5812695 | 33358.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
