Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5092 | Not Available | - | 5771716 - 5772312 | 21782.4 |
| uncharacterized protein duf2236 | BCL90_5093 | Not Available | - | 5773228 - 5773983 | 29009.8 |
| hypothetical protein | BCL90_5094 | Not Available | - | 5773967 - 5774470 | 19077.3 |
| lrp/asnc family leucine-responsive transcriptional regulator | BCL90_5095 | Not Available | + | 5775062 - 5775529 | 17735.6 |
| hamp domain-containing protein | BCL90_5096 | Not Available | - | 5775577 - 5776884 | 50029.1 |
| dna-binding ntrc family response regulator | BCL90_5097 | Not Available | - | 5776826 - 5778199 | 51203.1 |
| putative abc transport system permease protein | BCL90_5098 | Not Available | - | 5778218 - 5779399 | 44628.6 |
| putative abc transport system permease protein | BCL90_5099 | Not Available | - | 5779419 - 5780651 | 46755.5 |
| putative abc transport system atp-binding protein | BCL90_5100 | Not Available | - | 5780661 - 5781326 | 24570.9 |
| outer membrane protein tolc | BCL90_5101 | Not Available | - | 5781353 - 5782813 | 55233.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
