Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf3347 | BCL90_5071 | Not Available | + | 5746564 - 5747115 | 19957.0 |
| citrate synthase | BCL90_5072 | Not Available | + | 5747249 - 5748538 | 48537.5 |
| uncharacterized protein duf3667 | BCL90_5073 | Not Available | - | 5748609 - 5749730 | 43714.7 |
| mfs transporter, nhs family, xanthosine permease | BCL90_5074 | Not Available | - | 5749743 - 5751122 | 52185.4 |
| hypothetical protein | BCL90_5075 | Not Available | - | 5751310 - 5751924 | 22733.2 |
| electron transfer flavoprotein alpha subunit apoprotein | BCL90_5076 | Not Available | - | 5751976 - 5752944 | 33568.2 |
| electron transfer flavoprotein beta subunit | BCL90_5077 | Not Available | - | 5753047 - 5753784 | 26262.4 |
| tetratricopeptide repeat protein | BCL90_5078 | Not Available | + | 5753916 - 5754251 | 12886.0 |
| chromate transporter | BCL90_5079 | Not Available | + | 5754288 - 5755505 | 44480.1 |
| primary replicative dna helicase | BCL90_5081 | Not Available | - | 5755996 - 5757558 | 57960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
