Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid a 3-o-deacylase pagl | BCL90_5024 | Not Available | - | 5698416 - 5699525 | 41437.4 |
| hypothetical protein | BCL90_5025 | Not Available | - | 5699525 - 5700481 | 35750.4 |
| hypothetical protein | BCL90_5028 | Not Available | + | 5701799 - 5702326 | 20151.8 |
| hypothetical protein | BCL90_5029 | Not Available | + | 5703061 - 5703423 | 13833.5 |
| hypothetical protein | BCL90_5030 | Not Available | + | 5703521 - 5704213 | 26576.8 |
| hypothetical protein | BCL90_5032 | Not Available | + | 5704962 - 5706260 | 51390.1 |
| hypothetical protein | BCL90_5033 | Not Available | - | 5706332 - 5707153 | 31922.5 |
| site-specific recombinase xerd | BCL90_5034 | Not Available | - | 5707405 - 5708625 | 46191.3 |
| Trna-lys | Not Available | Not Available | + | 5708874 - 5708946 | Not Available |
| hypothetical protein | BCL90_5036 | Not Available | - | 5709150 - 5709344 | 7237.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
