Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| condensation domain-containing protein | BCL90_0011 | Not Available | - | 13504 - 14739 | 46291.6 |
| hypothetical protein | BCL90_0012 | Not Available | - | 15134 - 15499 | 13336.2 |
| pas domain s-box-containing protein | BCL90_0013 | Not Available | - | 16310 - 20215 | 147638.0 |
| two-component system cheb/cher fusion protein | BCL90_0014 | Not Available | + | 20622 - 22061 | 55234.8 |
| hypothetical protein | BCL90_0015 | Not Available | - | 22177 - 22272 | 3733.67 |
| crp-like camp-binding protein | BCL90_0016 | Not Available | + | 22355 - 22957 | 23316.4 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | BCL90_0017 | Not Available | + | 23047 - 23817 | 30396.5 |
| thioredoxin-like protein | BCL90_0018 | Not Available | - | 24517 - 25599 | 41966.9 |
| hypothetical protein | BCL90_0019 | Not Available | - | 25656 - 25832 | 6047.11 |
| vitamin k epoxide reductase family protein | BCL90_0020 | Not Available | - | 25904 - 27505 | 60854.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
