Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| concanavalin a-like lectin/glucanase superfamily protein | BCL90_0251 | Not Available | Positive | 334543 - 338076 | 130213.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 338096 - 338163 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 339113 - 339211 | Not Available |
| glycosyl hydrolase family 97 | BCL90_0252 | Not Available | Negative | 338570 - 340558 | 74320.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 341727 - 342124 | Not Available |
| carbohydrate binding protein with cbm6 domain | BCL90_0253 | Not Available | Negative | 340908 - 342266 | 51271.0 |
| carbohydrate binding protein with cbm6 domain | BCL90_0254 | Not Available | Negative | 342431 - 343804 | 51146.6 |
| protein of unknown function (duf303) | BCL90_0255 | Not Available | Negative | 343814 - 344755 | 34402.6 |
| hypothetical protein | BCL90_0256 | Not Available | Negative | 344908 - 345006 | 3897.88 |
| hypothetical protein | BCL90_0257 | Not Available | Positive | 345195 - 345296 | 3355.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
