Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | BCL90_0244 | Not Available | - | 318776 - 322072 | 121771.0 |
| fecr family protein | BCL90_0245 | Not Available | - | 322205 - 323395 | 44207.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_0246 | Not Available | - | 323436 - 324047 | 23860.4 |
| tonb-linked susc/raga family outer membrane protein | BCL90_0247 | Not Available | + | 325507 - 328560 | 112582.0 |
| Ncrna_class:other | Not Available | Not Available | + | 326843 - 327000 | Not Available |
| putative outer membrane starch-binding protein | BCL90_0248 | Not Available | + | 328596 - 330506 | 71420.1 |
| Ncrna_class:other | Not Available | Not Available | + | 329884 - 329949 | Not Available |
| hypothetical protein | BCL90_0249 | Not Available | + | 330846 - 331013 | 6500.11 |
| Ncrna_class:other | Not Available | Not Available | + | 333488 - 333555 | Not Available |
| ig-like protein group 4 | BCL90_0250 | Not Available | - | 330952 - 334014 | 114197.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
