Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | + | 305221 - 305312 | Not Available |
| crp-like camp-binding protein | BCL90_0235 | Not Available | - | 305697 - 306311 | 23743.0 |
| uncharacterized protein duf4859 | BCL90_0236 | Not Available | - | 307711 - 309576 | 70027.6 |
| hypothetical protein | BCL90_0237 | Not Available | + | 310141 - 310359 | 8208.1 |
| carbamoyltransferase | BCL90_0238 | Not Available | - | 310450 - 312210 | 65657.0 |
| hypothetical protein | BCL90_0239 | Not Available | - | 312224 - 312373 | 5769.34 |
| hypothetical protein | BCL90_0240 | Not Available | - | 312386 - 312769 | 14457.6 |
| gdsl-like lipase/acylhydrolase family protein | BCL90_0241 | Not Available | - | 312771 - 314591 | 69563.6 |
| alpha-d-xyloside xylohydrolase | BCL90_0242 | Not Available | - | 314643 - 316973 | 88538.6 |
| susd-like starch-binding protein associating with outer membrane | BCL90_0243 | Not Available | - | 317127 - 318764 | 60696.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
