Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | + | 232951 - 233024 | Not Available |
| hypothetical protein | BCL90_0178 | Not Available | + | 234262 - 234642 | 14904.6 |
| lipopolysaccharide export system permease protein | BCL90_0179 | Not Available | + | 234739 - 236097 | 50912.8 |
| Ncrna_class:other | Not Available | Not Available | + | 234788 - 234853 | Not Available |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | BCL90_0180 | Not Available | + | 236237 - 237448 | 44150.2 |
| uncharacterized protein duf490 | BCL90_0181 | Not Available | - | 239127 - 243347 | 157022.0 |
| o-sialoglycoprotein endopeptidase | BCL90_0182 | Not Available | + | 243629 - 244630 | 36114.6 |
| hypothetical protein | BCL90_0183 | Not Available | + | 245040 - 245237 | 7152.11 |
| iron complex outermembrane receptor protein | BCL90_0184 | Not Available | + | 245314 - 247668 | 86002.3 |
| hypothetical protein | BCL90_0185 | Not Available | + | 247749 - 247895 | 5136.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
